BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022C06LP1|AL427877
(1070 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1032 2079 0.0
>3x_Contig1032
Length = 3920
Score = 2079 bits (1046), Expect = 0.0
Identities = 1064/1070 (99%), Gaps = 2/1070 (0%)
Strand = Plus / Plus
Query: 1 gatcgcaacgaggtacgtttactcgtatttaaatcgtcttccaatgagtgaagatgaaag 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2393 gatcgcaacgaggtacgtttactcgtatt-aaatcgtcttccaatgagtgaagatgaaag 2451
Query: 61 aaacagtgcgttccccaagcatgtgcgaatctaccgagttggagcccgaagatgaggcaa 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2452 aaacagtgcgttccccaag-atgtgcgaatctaccgagttggagcccgaagatgaggcaa 2510
Query: 121 tgggccaatttgtcgactcaatgaatctggataatgatgcacaggacttgccatggtacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2511 tgggccaatttgtcgactcaatgaatctggataatgatgcacaggacttgccatggtacg 2570
Query: 181 agagtgaccagatacagaagtatacagacgtggcactggagcagtcctctttgcccctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2571 agagtgaccagatacagaagtatacagacgtggcactggagcagtcctctttgcccctac 2630
Query: 241 cacaacgtgaaatgttccgagccactgcaagaaacccatcagcaatcccagctatctcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2631 cacaacgtgaaatgttccgagccactgcaagaaacccatcagcaatcccagctatctcac 2690
Query: 301 tacatagacagcagcaagtgatcctcgagtgcgttcatcagaagttcatcgttgggaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2691 tacatagacagcagcaagtgatcctcgagtgcgttcatcagaagttcatcgttgggaaac 2750
Query: 361 gggatcaacaggacttaaacatcccaccgatgagcaagatgattctcaagaagattactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2751 gggatcaacaggacttaaacatcccaccgatgagcaagatgattctcaagaagattactc 2810
Query: 421 caaaatacaacgctgacgtttctctgtcgaacaggatcaaggaacagttcaacgtagtaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2811 caaaatacaacgctgacgtttctctgtcgaacaggatcaaggaacagttcaacgtagtaa 2870
Query: 481 agaaagaggtgtcggtacaaacaccagtgaatattgaacaagagtttgaagaacaagacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2871 agaaagaggtgtcggtacaaacaccagtgaatattgaacaagagtttgaagaacaagacc 2930
Query: 541 ctgaattgctcgatttggacctcttattagcgcgcggtgcacgctagctaattcaggcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2931 ctgaattgctcgatttggacctcttattagcgcgcggtgcacgctagctaattcaggcac 2990
Query: 601 tggttacatagtgatatctatacatatatatatatatwtkakacttctgtataaaaatgc 660
||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 2991 tggttacatagtgatatctatacatatatatatatatatgagacttctgtataaaaatgc 3050
Query: 661 aattgcgggataaaacgtggtgaatcgaatgggttacatctcgaatggcaaccagcacca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3051 aattgcgggataaaacgtggtgaatcgaatgggttacatctcgaatggcaaccagcacca 3110
Query: 721 ggcaacccacgttacgacggccccttgtcgtccgcaaacctgcctttttccccatattct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3111 ggcaacccacgttacgacggccccttgtcgtccgcaaacctgcctttttccccatattct 3170
Query: 781 tcagatctctaaagttcgtttcccttctttccattctcgaccacgagatttccatataag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3171 tcagatctctaaagttcgtttcccttctttccattctcgaccacgagatttccatataag 3230
Query: 841 cacagaaagaattacgagccacaagacgaaaaacctgttttaaggcttggcacagagatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3231 cacagaaagaattacgagccacaagacgaaaaacctgttttaaggcttggcacagagatt 3290
Query: 901 tacaaaccaattgattgcacaattaatatcattcatcttgaacacattcactttgcatta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3291 tacaaaccaattgattgcacaattaatatcattcatcttgaacacattcactttgcatta 3350
Query: 961 taaggtttccttctgataataacatctactgatactcacatcttttgtaacataaaggag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3351 taaggtttccttctgataataacatctactgatactcacatcttttgtaacataaaggag 3410
Query: 1021 aggatagagtattggctattgaacattataactaaacgcaaagaaggraa 1070
||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3411 aggatagagtattggctattgaacattataactaaacgcaaagaaggaaa 3460
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,128
Number of Sequences: 1807
Number of extensions: 10128
Number of successful extensions: 707
Number of sequences better than 1.0e-20: 1
length of query: 1070
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1054
effective length of database: 10,329,639
effective search space: 10887439506
effective search space used: 10887439506
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)